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Dataset Title:  Northwest Atlantic per-pixel spring bloom metrics derived from OC-CCI POLY4
satellite Chlorophyll-a, 1998-present
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Institution:  dfo_bio   (Dataset ID: bio_remote_sensing_occci_nwa_poly4_spring_bloom)
Information:  Summary ? | License ? | FGDC | ISO 19115 | Metadata | Background (external link) | Data Access Form | Files
 
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Things You Can Do With Your Graphs

Well, you can do anything you want with your graphs, of course. But some things you might not have considered are:

The Dataset Attribute Structure (.das) for this Dataset

Attributes {
  time {
    String _CoordinateAxisType "Time";
    Float64 actual_range 8.836128e+8, 1.7040672e+9;
    String axis "T";
    String calendar "standard";
    String ioos_category "Time";
    String long_name "Time";
    String standard_name "time";
    String time_origin "01-JAN-1970 00:00:00";
    String units "seconds since 1970-01-01T00:00:00Z";
  }
  latitude {
    String _CoordinateAxisType "Lat";
    Float64 actual_range 39.020833333333336, 65.97916666666667;
    String axis "Y";
    String ioos_category "Location";
    String long_name "Latitude";
    String standard_name "latitude";
    String units "degrees_north";
  }
  longitude {
    String _CoordinateAxisType "Lon";
    Float64 actual_range -75.97916666666667, -42.020833333333336;
    String axis "X";
    String ioos_category "Location";
    String long_name "Longitude";
    String standard_name "longitude";
    String units "degrees_east";
  }
  t_start {
    Float32 _FillValue NaN;
    Float64 colorBarMaximum 200.0;
    Float64 colorBarMinimum 0.0;
    String ioos_category "Ocean Color";
    String long_name "Day of year of the start of the spring phytoplankton bloom";
    Float32 valid_max 176.0;
    Float32 valid_min 1.0;
  }
  t_duration {
    Float32 _FillValue NaN;
    Float64 colorBarMaximum 250.0;
    Float64 colorBarMinimum 0.0;
    String ioos_category "Ocean Color";
    String long_name "Duration of the spring phytoplankton bloom";
    String units "days";
    Float32 valid_max 220.0;
    Float32 valid_min 1.0;
  }
  amplitude_real {
    Float32 _FillValue NaN;
    Float64 colorBarMaximum 150.0;
    Float64 colorBarMinimum 0.0;
    String ioos_category "Ocean Color";
    String long_name "Maximum concentration during the spring phytoplankton bloom period";
    String units "mg/m3";
    Float32 valid_max 100.0;
    Float32 valid_min 0.0;
  }
  magnitude_real {
    Float32 _FillValue NaN;
    Float64 colorBarMaximum 30.0;
    Float64 colorBarMinimum 0.03;
    String colorBarScale "Log";
    String ioos_category "Ocean Color";
    String long_name "Total chlorophyll-a produced during the spring phytoplankton bloom period";
    String units "days*mg/m3";
    Float32 valid_max 22000.0;
    Float32 valid_min 0.0;
  }
  annual_mean {
    Float32 _FillValue NaN;
    Float64 colorBarMaximum 30.0;
    Float64 colorBarMinimum 0.03;
    String colorBarScale "Log";
    String ioos_category "Ocean Color";
    String long_name "Average chlorophyll-a over the year";
    String standard_name "mass_concentration_of_chlorophyll_a_in_sea_water";
    String units "mg/m3";
    Float32 valid_max 100.0;
    Float32 valid_min 0.0;
  }
  NRMSE_bloom {
    Float32 _FillValue NaN;
    Float64 colorBarMaximum 0.1;
    Float64 colorBarMinimum 0.0;
    String ioos_category "Ocean Color";
    String long_name "Root mean square error between the fitted Gaussian and real chl-a values during the bloom period, normalized to amplitude_real";
    String units "mg/m3";
    Float32 valid_max 1.0;
    Float32 valid_min 0.0;
  }
  percent_dineof {
    Float32 _FillValue NaN;
    Float64 colorBarMaximum 100.0;
    Float64 colorBarMinimum 0.0;
    String ioos_category "Ocean Color";
    String long_name "Percentage of days with pixel values estimated using DINEOF";
    Float32 valid_max 100.0;
    Float32 valid_min 0.0;
  }
  NC_GLOBAL {
    String cdm_data_type "Grid";
    String Conventions "CF-1.10, COARDS, ACDD-1.3";
    String creator_email "Stephanie.Clay@dfo-mpo.gc.ca";
    String creator_group "SOPhyE (Satellite Ocean colour and Phytoplankton Ecology group), Ocean Monitoring and Modelling Section";
    String creator_name "Stephanie Clay";
    String creator_type "person";
    String creator_url "https://bio-rsg.github.io/";
    String date_created "2025-08-31T11:52:23Z";
    Float64 Easternmost_Easting -42.020833333333336;
    String geographic_crs_epsg_code "EPSG:4326";
    Float64 geospatial_lat_max 65.97916666666667;
    Float64 geospatial_lat_min 39.020833333333336;
    Float64 geospatial_lat_resolution 0.04166666666666667;
    String geospatial_lat_units "degrees_north";
    Float64 geospatial_lon_max -42.020833333333336;
    Float64 geospatial_lon_min -75.97916666666667;
    Float64 geospatial_lon_resolution 0.04166666666666667;
    String geospatial_lon_units "degrees_east";
    String history 
"Created with map_and_write_to_netcdf.R. Input data were 4km-resolution spring bloom metrics and annual average chlorophyll-a (chl-a) concentration per bin. Bloom metrics for each bin and year were derived from a shifted gaussian curve fitted to the time series of daily logged chl-a data within that bin. Chl-a data were taken from the POLY4 chl-a dataset which was generated using remote sensing reflectances (Rrs) from the OC-CCI multisensor product (www.oceancolour.org) and regionally-tuned coefficients, and subsequently gap-filled using DINEOF (https://github.com/aida-alvera/DINEOF).
2025-09-03T16:04:58Z (local files)
2025-09-03T16:04:58Z https://cioosatlantic.ca/griddap/bio_remote_sensing_occci_nwa_poly4_spring_bloom.das";
    String infoUrl "https://bio-rsg.github.io/";
    String institution "dfo_bio";
    String keywords "agencies, agencies-non-us, amplitude, amplitude_real, annual_mean, average, based, between, bio, bloom, ca/dfo/bio, canada, chemistry, chl, chl-a, chlorophyll, chlorophyll-a, color, concentration, data, day, days, department, dfo, dineof, duration, during, earth, Earth Science > Oceans > Ocean Chemistry > Chlorophyll, Earth Science > Oceans > Ocean Chemistry > Pigments > Chlorophyll, Earth Science > Oceans > Ocean Optics > Chlorophyll > Chlorophyll Concentration, error, estimated, fisheries, fitted, gaussian, government, latitude, longitude, magnitude_real, mass, mass_concentration_of_chlorophyll_a_in_sea_water, maximum, mean, metrics, non, normalized, NRMSE_bloom, nwa, observation, occci, ocean, ocean color, oceans, optics, over, percent_dineof, percentage, period, phytoplankton, pigments, pixel, platforms, Platforms > Space-based Platforms > Earth Observation Satellites >, produced, providers, Providers > GOVERNMENT AGENCIES-NON-US > CANADA > CA/DFO/BIO, real, root, satellites, science, sea, seawater, space, space-based, spring, square, start, t_duration, t_start, time, total, using, values, water, with, year";
    String keywords_vocabulary "GCMD Science Keywords";
    String license "https://creativecommons.org/licenses/by/4.0/";
    String map_projection "Equidistant Cylindrical (Plate Carrée)";
    String mission "Multiple missions";
    Float64 Northernmost_Northing 65.97916666666667;
    String platform "Multiple platforms";
    String POLY4_coefficients "0.59779,-3.15824,-0.80348,0.93129,0.78322";
    String processing_level "L4 Mapped";
    String product_name "gaussian_fit_metrics_2010.nc";
    String projected_crs_epsg_code "EPSG:4087";
    String references "doi:10.3390/s19194285; https://catalogue.ceda.ac.uk/uuid/690fdf8f229c4d04a2aa68de67beb733; doi:10.3390/rs11222609; Layton, C., Devred, E., DeTracey B.. 2022. A comparison of phytoplankton spring bloom fitting methods using MODIS satellite-derived chlorophyll-a concentration for the Maritimes region. Can. Tech. Rep. Hydrogr. Ocean Sci. 340: vii + 22 p.; Stephanie Clay, Chantelle Layton, & Emmanuel Devred. (2021). BIO-RSG/PhytoFit: First release (v1.0.0). Zenodo. https://doi.org/10.5281/zenodo.4770754; doi:10.1016/j.ocemod.2004.08.001";
    String region "Northwest Atlantic";
    String reprocessing "v6.0";
    String sensor "Multiple sensors";
    String source "Spring bloom metrics and annual average chlorophyll-a (chl-a) derived from DINEOF-filled POLY4 chl-a. POLY4 chl-a were created using remote sensing reflectance (Rrs) data from the OC-CCI multisensor product, which were generated by the Plymouth Marine Laboratory (PML) as part of the European Space Agency (ESA) climate change initiative (www.oceancolour.org).";
    String sourceUrl "(local files)";
    Float64 Southernmost_Northing 39.020833333333336;
    String spatial_resolution "4.64km at equator";
    String standard_name_vocabulary "CF Standard Name Table v79";
    String summary "NWA OCCCI spring bloom metrics 2024";
    String temporal_range "year";
    Int32 time 2010;
    String time_coverage_end "2024-01-01T00:00:00Z";
    String time_coverage_start "1998-01-01T00:00:00Z";
    String title "Northwest Atlantic per-pixel spring bloom metrics derived from OC-CCI POLY4 satellite Chlorophyll-a, 1998-present";
    String tools "https://github.com/BIO-RSG/oceancolouR";
    Float64 Westernmost_Easting -75.97916666666667;
  }
}

 

Using griddap to Request Data and Graphs from Gridded Datasets

griddap lets you request a data subset, graph, or map from a gridded dataset (for example, sea surface temperature data from a satellite), via a specially formed URL. griddap uses the OPeNDAP (external link) Data Access Protocol (DAP) (external link) and its projection constraints (external link).

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

griddap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/griddap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/griddap/jplMURSST41.htmlTable?analysed_sst[(2002-06-01T09:00:00Z)][(-89.99):1000:(89.99)][(-179.99):1000:(180.0)]
Thus, the query is often a data variable name (e.g., analysed_sst), followed by [(start):stride:(stop)] (or a shorter variation of that) for each of the variable's dimensions (for example, [time][latitude][longitude]).

For details, see the griddap Documentation.


 
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